Showing posts with label minerals. Show all posts
Showing posts with label minerals. Show all posts

Sunday, August 31, 2025

Fungi

Ever play 20 Questions? The classic first question is "Is if plant, animal, or mineral?"

 In my youth, biology courses were mostly descriptive. Everything was either plant, animal, or mineral but people started noticing that things were more complicated than that. For instance, where they thought that bacteria were single cell plants (they had cell walls like plants) they don't have a nucleus. The genetic material, DNA, was just floating around in the cell.

These guys



are sorta weird to. They look like plants but their cell walls are composed of chitin, the material that forms the shells of insects and crustaceans. So fungi don't quite fit the old scheme of things.

So, now, we have several "kingdoms" of living things. Plants and animals are still there but we also have the protista, single cell eukaryotic (the have cell nuclei) beings. That includes protozoa. And there are the monera that are prokaryotic (they don't have cell nuclei) and include the bacteria. The fungi have their own kingdom because of that cell walls thing.


But there are other schemes floating around. One splits the monera into the eubacteria, the true bacteria, and some weird organisms that like extreme conditions of temperature, chemical environments, pressure, etc., the archaebacteria.


Then there are slime molds that sometimes act like plants and at other times act like animals. Some protozoa lack mitochondria which is another kind of weird.

Things are a bit up in the air right now. Scientist would like to have a nice, simple classification scheme, but it looks like that is not to be 

Monday, May 8, 2023

Volcano 1: Golden

"I don't know.
I don't know.
I don't know where I'm a gonna go
When the volcano blows."

Charles Thompson, Violet Clarke. Volcano. Sung by Jimmy Buffett, 1979.

Well this volcano won't be blowing it's top. It's been dead for 60 something million years, but it's still interesting so I went to check it out and found more questions.

Golden is more than a day's outing. There's a lot(!) to see and do there. My goal was to visit the geology museum, then take a look at the lava flows on North Table Mountain, and finally to hike out to the actual volcano, but questions intruded so this blog will be continued at a later date. First, an introduction to the area...

A good place for an overview is the Jefferson County Government Center. It's the first thing you see when you get off the train on the W Line and it sits on a hill overlooking the town (remember that if you're on foot. You'll have to come back here if you take the train back home.) You see all the mountains surrounding Golden, Golden itself, and Clear Creek Canyon in which the town is nestled. The university, the golf course, the tourist attractions... they're all down there. And the lava flows, North and South Table Mountain are to the right in the photograph above. The actual volcano is some where to the northwest. It turns out, I don't know where. It might be that hill in the left background with a white streak going up and around it. On Google Maps and Rockd, it's called Rolston Dike. There is also a spot on North Table Mountain that has been proposed as the vent. Then there's another dike between Golden and Boulder that might be the actual volcano. I'll be checking out Rolston Dike on a later hike.

Sandstone


The Denver area was once beachfront property (Actually, it's been beachfront property several times in the past.) When the sand that formed this rock was deposited by an inland sea, it was near the equator. You probably would have loved it. You could sit on your patio and watch the triceratops graze in you back forty.

The first triceratops skull in Colorado was found here. It now resides in the Denver Museum of Science and Natural History. Almost all the fossils found in the area (and there have been many!) have been found in this stuff.

I would imagine this is Dakota sandstone, the same stuff you see on Dinosaur Ridge. You won't see a hogback here in Golden, though. Clear Creek has pretty much obliterated it. You might wonder how such a little bitty creek could do so much damage. Of course, if you lived here long enough to have seen some of the past flash floods, you might not, but that's not the answer.

Did I mention that Colorado used to be near the equator? Climate has changed and when Clear Creek started carving out this part of the Rockies, there was a lot more water and it was a roaring river.

A cairn

It's a tradition around here. Hikers leave their marks by adding to these little stacks of stone. If you hike in Colorado, you will see them at the side of trails or in the middle of streams. Of course, cairns have been around for as long as humans have been around, for instance, as boundary markers or memorials, but they're not a constant part of the human landscape. I didn't see them much in the southeastern United States. I suspect that, once one person starts a stack, others join in.

Lookout Mountain (left) and Mount Galbraith (right)

Over there, there are those huge masses of crystalline igneous and metamorphic rock, over here it's a lot of sedimentary stuff. That usually means that there's a fault somewhere around. You can't see the one that runs along the mountain front. It's covered up by a lot of debris, but it's there and it's big. When the Rocky Mountains rose, it pushed the rock from the west up and over the rocks to the east. How do we know? 

Well, we can drill down to the different layers of rock and see which layers match. We not only know that it happened...we even now how much it happened!

The Golden fault parallels highway 6 in Golden about a city block west. It pushed the very old rocks to the west about 14,000 feet up and about a mile and a half east up and over the younger rocks of the plains. Mind you, it didn't happen overnight, but with all that slippage, something had to break and that would explain the volcanic activity here, and near Colorado Springs, and in the San Juan mountains of southern Colorado (which are almost all volcanic), and other places in Colorado.

School of Mines visitor center.

It doesn't sound like much, "School of Mines", but I realized when I was a tutor, that the Golden School of Mines is a prestigious university with tough entrance requirements. They are leading edge, for instance, beginning the first graduate program in space resources in 2018. Although they do offer minors in arts degrees, all the majors are STEM subjects and economics.

I always enjoy college campuses. They are usually sprawling museums and offer programs for the surrounding communities. Mines isn't different. The grounds is peppered with numerous statues.

The architecture is always fun to look at. Check out the pilasters on this building.

The building across from the geology museum, the Steinhauer Field House, is especially ornamented.

It was a Sunday, so the museum was only open from 1:00 to 4:00 pm. I had plenty of time to wonder around Golden before then.

Just down the street from the museum, Clear Creek is already a respectable stream. Of course, Clear Creek, the same Clear Creek I visited on the G Line, is many of the reasons for Golden. Geographically, the stream provided the canyon that Golden resides in. It is also what drew prospectors to this part of the country (the name "Rolston" is as prominent here as in Arvada) and Golden in particular. I made it a point to collect some material from the stream bed to look at. And when big industries came to Golden, they crowded around to creek for water and the train lines that developed nearby. Clear Creek also provides for tourists by offering trails and water sports like fishing and kayaking.

The Golden History Museum, on both banks of Clear Creek in downtown Golden, provides glimpses into the early life of Golden including this preserved slice of Golden from the latter part of the 1800s.

Notice the sign on the fence warning visitors that the bee hives are real and stingy.

The museum is housed in a large building with many thousands of items, but the public display is in a single room. It's mostly a big (but breathtaking) mineral collection, but it does show a collection of antique instruments.

The minerals are from around the world (organized by region)...
Native gold

 Colorado...
Rhodochrosite

Amazonite

and, more to the point of this blog, Golden.
Zeolites from North Table Mountain.

Zeolites are moderately rare in nature but are so useful that they have been manufactured in a great variety. They're useful because the aluminum silicate molecules have an open ring structure that's called "microscopically porous." By adding other elements and changing the conditions under which the crystals form, the size of the spaces between atoms and the charges on the molecules can be custom made for different purposes. Microfilters and ion-exchange materials are often made of zeolites, but there are many other uses.

In nature, there are a handful of different zeolites. The above specimens were collected on the Table Mountain lava flows above Golden. These are huge compared to the typical specimen, such as the one below that I photographed on North Table Mountain.


There are three lava flows on North Table mountain and two on South Table Mountain. The zeolites occur in the second flow as a white filling in bubbles (called "vesicles") in the basalt. They form as alkaline ground water percolates through the basalt and precipitates dissolved materials into the bubbles.

 After drooling over the gorgeous specimens in the museum, I headed back to Clear Creek, and made my way to the flank of North Table Mountain, a grueling hike up steep residential streets.

View from North Table Mountain
Lookout Mountain to the right
South Table Mountain to the left
To the Rockies side
South Table Mountain (that's Castle Rock at right center)

My destination this time was the Golden Cliffs trailhead. The trail from there runs up from a parking area to and along the base of the top lava flow.

Golden Cliffs

Detail

The Golden Cliffs trailhead is a good choice for exploring the basalt cliffs of North Table Mountain. The West trailhead, on the other hand, provides a more gentle ramp up to the top. 

The photos from Boulder Canyon show a course, crystalline rich, granite. Basalt is not that. The difference is that granite and related rocks solidify from magma deep underground. They solidify slowly, allowing recognizable crystals to form from the melt. Basalt, on the other hand, solidifies from lava on the Earth's surface. It solidified quickly so that the molecules don't have time to organize into crystals. The microscopic particles tend to be amorphous like glass. But the chemical constitution of basalt is similar to the larger grained igneous rocks.

Basalt is an example of what's called an aphanitic rock, an igneous rock with a texture in which individual particles are not visible to unaided vision and are often not crystalline. Phanitic rocks, like granite, have easily distinguishable grains.

A few basalt outcrops get most of the attention. The famous ones are the Giant's Causeway in Scotland and the Devil's Tower (also known as Bear Butte) in Wyoming. But basalt outcrops are widely distributed. And, in North America, they're not exclusive to the west. The Palisades along the Hudson River are a good example.

The Table Mountain basalts have the same columnar appearance as the other major outcroppings (it makes them popular with rock climbers). Called "columnar jointing", it's just the way they break as they cool and shrink. You may have noticed that, when an expanse of mud dries out, the material tends to shrink and break up into polygonal shapes. The same thing happens to basalt as it solidifies.

Mud on Little Dry Creek Trail

Lichen on basalt

The Table Mountains are also known as a conservation site for lichens. Golden Parks and Recreation ask that visitors stay to the trails to protect these delicate symbiotic organisms, but, of course, some hikers won't, so there are areas of the mesa that are off limits.

Normally, algae and cyanobacteria can't survive in dry climates. They prefer hanging out on rocks in ponds, but in lichen, they have solved the problem. Lichen is actually two organisms in one. The fungus protects its companion organisms from the arid environment while it obtains nutrients from them. And they have an important place in their environment by being food for both large (for example, reindeer) and small (springtails).

There is a lot packed into the narrow valley between the Table Mountains. A lot of it is the Coors brewery and associated industries but there's also Rocky Mountain Metal Containers, the Colorado Railroad Museum, Colorado highway 58 and West 44th Avenue, and, of course, Clear Creek. Clear Creek, after all, is the reason the gap is there.

The volcano and lava flows are 62 to 64 million years old. Geologically, that's not very old, but they've been around long enough to have been deeply buried by sediments from the Rocky Mountains. Clear Creek, then a powerful river, flowed straight across those sediments and, when it got down to the lava, it kept right on cutting until it cut through all three flows. It's not nearly as big now, but it's still flowing out of the Mountains, through Golden, between the Table Mountains and through Arvada, to join the South Platte River North of Denver.

By the way, Clear Creek is weird in that one of it's tributaries is a river, Fall River. And, of course, Clear Creek was the site of the first gold strike in Colorado and the reason that people started flocking to the future Denver.

After exploring the flank of North Table Mountain, I returned home, thankfully by train with most of the walking downhill.

Now, the sample of sand I collected from the bed of Clear Creek in Golden...

I wasn't really looking for gold, although people do pan for gold on Clear Creek. They might even find some!

My father and I panned for gold in North Georgia for fun. One of our main pieces of equipment was an eye dropper, which we used to suck up the tiny specks of gold we found in creek sand. Those are called, by the initiated, "color" or, more often, "dust".

The Bible is often quoted to say, "gold is where they find it." That's a mistranslation for two reasons. The passage is Job 28:1, "Surely, there is a vein for the silver, and a place for gold where they fine it."(King James version) The second error is that the word is "fine", not "find".

In other words, don't expect to find gold where you're looking for it. You'll find it where it's fined (that is, refined).

Gold is found here...
(in the museum), or here...
(on your electroplated flatware.)

No, I was just sifting through the sand to see what Clear Creek was washing out of the mountains, and I was not disappointed with that, either. It was exactly what I expected.

First, I spread out the sand on a Petri dish and eyeballed it. The grains graded from course chunks of rock around a couple of millimeters to very fine dust. There were some sparkly bits but they turned out to be mica.

Next, I shined and ultraviolet light on the sample and was surprised to see that it actually fluoresced pink! I didn't expect that and I don't know if it was caused by some pollutant or it there is something in the rocks west of town.
Finally, I used my smartphone microscope...
to look at the sample. 

Most of the sand was obviously washed out of the igneous and metamorphic rocks west of the Golden fault.

The chunkier stuff is granite. 
Of the individual particles, the clear grains are quartz, the cloudy white or red grains are feldspar (when I caught the light just right, they would shine like moonstone), the flat clear flakes are mica, and the black crystals are mostly hornblende. These are the fundamental rock building minerals of igneous rock. Two others are amphiboles, also dark minerals related to the hornblende, and olivine, which is a constituent in many basaltic rocks.

Here are some more photomicrographs.

Mind you, don't pass up the pleasure of looking at sand under a microscope. As a teenager, I walked down to the creek at the bottom of the hill below my house and collected some sand. When I shined an ultraviolet light on it, some of the grains glowed a brilliant orange. Under the microscope, those grains were tiny octagons of thorite. I also saw zircons and tourmaline crystals.

I'll be revisiting North Table Mountain soon. Stay tuned.

Are there any ancient lava flows near you? Check out the Wikipedia article "List of places with columnar jointed volcanics" for hints.

Pull out a microscope and look at some samples of stream sand from streams near you. What kind of materials do you see? If you have a black light, do they fluoresce? Where did the sand come from - what kind of rock produced it?

Friday, May 27, 2022

The glow

At some time during my high school years or a little after, my parents and I visited a mine in southeastern Georgia. They mined a fine sand, not for silica, but for ores of elements like titanium, gadolinium, thorium, cerium, neodymium, lanthanum, and others that sound exotic to most people...rare earth elements.

These minerals, primarily zircon, rutile, monazite, and xenotime had been washed out of the ancient Appalachian mountains long ago. The eastern mountains of North America are very old and were, in their youth, much larger than the Rockies. They may have been as tall as today's Himalayas. To be worn down to their present size, a lot of stuff has been washed out and some of it was deposited near the ocean in Georgia.

The sand was scooped up and washed down helical troughs. As it descended the troughs, it moved faster and faster spinning off, first, the lighter sand and, then, heavier and heavier materials, separating the sands nicely by density. Our guide gave us four very generous samples.

The sand was very fine but our microscope revealed wonders. The hard minerals retained their crystal forms, tiny sparkling jewels. The zircon provided the extra of being fluorescent, glowing a dull red in the light of our ultraviolet lamp.

When light meets matter, some of it is absorbed and several things can happen according to the intensity and wavelength of the light, and the kind of matter. The vibrations of infrared and microwave radiation are too big to get into the atoms that make up most materials, but they can certainly shake up the larger particles. That's why infrared and microwave radiation heats things up. Heat is just the motion of particles that make up matter. Shorter wavelengths can move the electrons around in individual atoms and make some interesting things happen.

When visible light hits an atom, the energy it imparts can kick an electron further out from the nucleus of it's atom. When it falls back to it's rest state, it will give the energy back as the same wavelength of light (in a colorless material) or as some other wavelength of light (in a colored material).

There are shorter wavelengths of light. Most people can't see ultraviolet light (aka "black light") but some substances can absorb it and re-emit light of a visible wavelength giving the impression that the material is glowing with its own light. Designers use this phenomenon, called "fluorescence", to make highly visible objects. The terms "dayglow" and "neon" are often used to describe the products. "Dayglow" is especially appropriate since there is enough ultraviolet light in sunlight to set them off and give them a vibrant appearance.

Ultraviolet light is often divided into two categories - long and short wavelengths. The longer wavelengths are close to the visible spectrum. In fact, some people can see some of the longer wavelengths of ultraviolet light. These are the wavelengths targeted by designers because shorter wavelengths...

well, they burn you. Short wavelength ultraviolet light is the part of sunlight that causes sunburn. The shorter the wavelength of light, the more energy it carries, and the larger a push it can give electrons in atoms. Short wavelength ultraviolet is the beginning of the spectrum of ionizing radiation. It is so energetic that it can knock electrons right off atoms. Shorter wavelengths include X rays and gamma rays.

I remember LED lights when they became available to consumers. The Christmas lights were laughable. At that time, you could only get red, green, and yellow LEDs but they were very dim. Later they figured out how to make them much brighter. But the goal was LEDs for illumination because solid state LEDs operate cooler, last longer, and use way less electricity to produce the same amount of light. The problem was...who wants to live in a house lit by red, green, or yellow lights?

LEDs are near-monochromatic light sources. One will only produce light in a very narrow band of colors. After a while, substances were found that emitted all the colors, from infrared to ultraviolet, but white, the color most people want to live in, isn't actually a color. It's a mixture of all the colors.

Engineers found two solutions. When they placed different colors of LEDs together they could mix the colors to give off a reasonable illumination. Then, the problem became a simple matter of aesthetically balancing the color blend.

The other solution became the most common. Here's a picture of the ceiling lamp in my bedroom.

Here it is turned on.

Those are LED bulbs. When I shine my ultraviolet flashlight (with it's single ultraviolet LED) on one of the bulbs, it looks like this.

That's not terribly impressive, but it is white. The secret of the white light LED bulb is that the light element is a printed circuit board with several ultraviolet LEDs plus some other color LEDs to balance the color produced. And the inside of the bulb is coated with a fluorescent material.

The bulbs are well designed and not a lot of the UV light escapes. I know this because even the long wavelengths make my skin tingle. Also, I have some neon paints and they look pretty drab under the house lights.


Sunlight perks them up and the UV flashlight really makes them pop.

Recently, in a dollar store I noticed a disinfectant wand for less than $10. These things put out weak, shortwave UV light, so I bought one. Fluorescence is pretty specific. A material than will glow under one wavelength might not under another, or they might emit a different color. Here's what the paints look like under the short wavelength UV.

The glow is dim but, remember, the wand puts out much less radiation than the flashlight. Still, the colors of the fluorescence are about the same except the blue paint doesn't fluorescence at all under this short wavelength UV.

In 2000, I attended the PathwaysToDarkness party in Atlanta, Georgia. It was a meeting of vampires and weres. Appropriately, it was held at night and the place was dark (some vampires are sensitive to daylight and burn easily.) Except for the bar. There was a blacklight. And, of course, there was tonic water and absinthe. Why, "of course"?

Well, they both fluoresce under blacklight. Absinthe glows green and the quinine sulfate in tonic water blazes a brilliant blue. Want to see it?


Tonic water, for those that don't drink, is a bitter component of various mixed drinks that contains quinine sulfate measured in parts per million, so the glowing substance is present in only a very tiny amount. It became popular in the 1800s when it was found to have a curative affect on malaria. My father, who contracted the disease in southern Georgia began drinking again in old age to ease his leg cramps.

It doesn't fluorescence at all under my disinfectant wand but there are short wavelengths that do cause fluorescence. 
The main fluorescent entity isn't the quinine sulfate but the ions, quinine hydrogen sulfate and quinine dihydrogen sulfate. For that reason, increasing the hydrogen ion concentration of tonic water increases the fluorescence. Tonic water that uses carbonated water as solvent is already slightly acidic but I added some lemon juice to my tonic water to get a blazing blue glow.

Many things glow under black light making the ultraviolet flashlight a useful instrument for field geology. Scorpions, for instance, give off a ghostly white light. Some minerals also give off a characteristic glow and can aid in night prospecting.

When I was collecting, I had a few minerals that would glow brilliantly under a black light. A few were from Franklin, New Jersey, "The Fluorescent Mineral Capital of the World". The zinc mines around there produce excellent specimens. 

The few minerals I have now are so-so.

Fluorescence is named for the second minerals from the left and right in the top row, fluorite, which is  calcium fluoride. The one to its left also commonly fluoresces. It's calcite, the mineral that makes up limestone and marble. The mineral spotlighted on the bottom row is also calcite.

Caves generally form in limestone and the eastern United States is practically a limestone sponge with the Appalachian mountains floating on it. There are a lot of caves.

One favorite trick of cave tour guides is to carry a group deep in a cave and turn off the lights to show what darkness really is like. 

I visited a spectacular cave in northern Alabama called Cathedral Caverns and they apologized. When they turned off the lights, all the rocks glowed dimly. That's called "phosphorescence". 

In fluorescence, the atoms exposed to one wavelength of light absorb the light but immediately re-emit it with another wavelength. In the specimens above, invisible ultraviolet is re-emitted as red light. But in phosphorescence, it takes longer for the electrons in the atoms to calm down, so they are re-emitted over a period of time.

These particular minerals don't do much of anything under the disinfectant wand.
You can't see it in the photo, but the fluorite, second from the right in the upper row, does show a dull brown when exposed to this wavelength.

Sedimentary rocks, while they are often great for fossil hunters, do not usually provide good opportunities for mineral collectors, although some areas have gorgeous calcite crystals, but anywhere on land is an exciting place for a night hike with an ultraviolet light. Ultraviolet flashlights are inexpensive and even more powerful battery powered lights with both long and shortwave light sources can be found for less than $50.